STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_1734KEGG: mca:MCA0589 nitrate transporter, putative. (361 aa)    
Predicted Functional Partners:
Oter_3561
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcl:ABC3747 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein.
  
 0.977
Oter_1735
PFAM: major facilitator superfamily MFS_1; KEGG: swi:Swit_1705 major facilitator superfamily MFS_1.
 
   
 0.895
Oter_1900
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_6481 ABC transporter related.
 
      0.821
Oter_1514
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_1620 ABC transporter, ATPase subunit.
 
      0.802
Oter_2206
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: maq:Maqu_1013 ABC transporter related.
 
      0.801
Oter_0024
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_6478 ABC transporter related.
 
      0.792
Oter_1740
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: scl:sce8491 nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.784
Oter_2085
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU2413 ABC transporter, ATP-binding protein.
 
      0.784
Oter_0073
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psa:PST_2019 probable ATP-binding component of ABC transporter.
 
      0.781
Oter_1638
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_3324 ABC transporter, ATPase subunit.
 
      0.780
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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