STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_1955KEGG: hch:HCH_02969 uncharacterized protein/domain associated with GTPase. (164 aa)    
Predicted Functional Partners:
Oter_1956
Cyclic peptide transporter; KEGG: hch:HCH_02804 ABC-type siderophore export system, fused ATPase and permease components; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.832
Oter_1957
PFAM: band 7 protein; KEGG: hch:HCH_02803 membrane protease subunit stomatin/prohibitin-like protein.
 
     0.767
Oter_1954
KEGG: hch:HCH_02968 hypothetical protein.
       0.766
Oter_1961
Beta-ketoacyl synthase; PFAM: AMP-dependent synthetase and ligase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Male sterility domain; KR domain protein; Beta-ketoacyl synthase; KEGG: ava:Ava_4108 beta-ketoacyl synthase.
 
     0.607
Oter_1971
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: scl:sce8257 non-ribosomal peptide synthetase.
 
     0.553
Oter_1311
KEGG: sun:SUN_0694 hypothetical protein.
  
     0.550
Oter_1973
MCP methyltransferase, CheR-type; TIGRFAM: amino acid adenylation domain protein; PFAM: MCP methyltransferase CheR-type; AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; Methyltransferase type 11; Methyltransferase type 12; KEGG: ckl:CKL_2354 predicted nonribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
     0.532
Oter_1965
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; KEGG: mxa:MXAN_4414 non-ribosomal peptide synthase.
 
     0.521
Oter_1953
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bpd:BURPS668_A3289 ParA family protein.
       0.498
Oter_1959
PFAM: Thioesterase; KEGG: scl:sce0356 thioesterase.
 
     0.490
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.