STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_2015KEGG: maq:Maqu_4056 hypothetical protein. (161 aa)    
Predicted Functional Partners:
Oter_2014
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_2499 ABC transporter related.
       0.773
Oter_2016
PFAM: inner-membrane translocator; KEGG: ckl:CKL_2742 LivM; Belongs to the binding-protein-dependent transport system permease family.
       0.773
Oter_0734
KEGG: aba:Acid345_0528 hypothetical protein.
  
     0.628
Oter_2013
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pth:PTH_0073 ABC-type branched-chain amino acid transport systems, ATPase component.
       0.547
Oter_2017
PFAM: inner-membrane translocator; KEGG: bba:Bd3386 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.478
Oter_1371
PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: spe:Spro_2228 cupin 2 conserved barrel domain protein.
  
     0.469
Oter_1001
PFAM: conserved hypothetical protein; KEGG: psa:PST_3106 NAD-dependent aldehyde dehydrogenase.
  
    0.436
Oter_4346
KEGG: noc:Noc_1592 hypothetical protein.
  
    0.436
Oter_2171
KEGG: mlo:mlr3986 hypothetical protein.
  
     0.431
Oter_4103
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cbd:COXBU7E912_1554 glyoxalase family protein.
  
     0.400
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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