STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_2218KEGG: mxa:MXAN_6050 hypothetical protein. (555 aa)    
Predicted Functional Partners:
Oter_1104
Hypothetical protein.
    
 0.474
Oter_3646
PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: sus:Acid_2173 hypothetical protein.
  
     0.469
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.469
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
   
 0.464
Oter_2216
KEGG: cya:CYA_2836 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
   
 
 0.462
Oter_4558
PFAM: PepSY-associated TM helix domain protein; KEGG: mxa:MXAN_3914 PepSY-associated TM helix domain protein.
  
     0.459
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.444
Oter_2217
Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: sus:Acid_4959 multi-sensor hybrid histidine kinase.
   
 
 0.437
Oter_0358
PFAM: WD-40 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: afw:Anae109_3558 protein kinase.
  
 0.428
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.