STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_2257PFAM: Vitamin K epoxide reductase; KEGG: rba:RB2680 similar to suppressor for copper-sensitivity C. (438 aa)    
Predicted Functional Partners:
Oter_0897
KEGG: sru:SRU_2711 thiol:disulfide interchange protein DsbD, putative.
  
 
 0.809
Oter_3686
PFAM: restriction endonuclease; KEGG: ctr:CT783 predicted disulfide bond isomerase.
  
 
 0.722
Oter_4058
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: ade:Adeh_1026 cytochrome c biogenesis protein, transmembrane region.
  
 
 0.722
Oter_0137
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sus:Acid_3125 redoxin domain protein.
  
 
 0.657
Oter_3286
PFAM: FAD dependent oxidoreductase; KEGG: rba:RB1591 probable phytoene dehydrogenase.
 
     0.614
Oter_0823
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; KEGG: rba:RB3606 probable sensor protein FixL.
  
 
   0.547
Oter_3281
PFAM: FAD dependent oxidoreductase; KEGG: dps:DP2406 similar to phytoene dehydrogenase.
 
     0.542
Oter_3287
PFAM: phosphopantetheine-binding; KEGG: rba:RB1588 similar to acyl carrier protein.
  
    0.522
Oter_0496
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: sus:Acid_5381 redoxin domain protein.
  
 
 0.502
Oter_1445
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: sru:SRU_2819 thioredoxin, putative.
  
 
 0.502
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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