STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_2465PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: rci:RCIX2382 hydrogenase, small subunit-like protein (HycG-like). (279 aa)    
Predicted Functional Partners:
Oter_2457
KEGG: gme:Gmet_0374 respiratory-chain NADH dehydrogenase, subunit 1.
 
 0.999
Oter_2461
KEGG: rci:RCIX2386 hydrogenase, membrane subunit 3-like protein (EchB-like).
 
 
 0.999
Oter_2464
NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: rci:RCIX2383 hydrogenase, large subunit-like protein (HycE-like).
 
 0.999
Oter_2466
PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: gme:Gmet_0371 NADH-ubiquinone oxidoreductase, chain 49kDa.
 
 
 0.999
Oter_4115
PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: gur:Gura_2652 respiratory-chain NADH dehydrogenase, subunit 1.
 
 
 0.997
Oter_4118
NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: cth:Cthe_3020 NADH dehydrogenase (ubiquinone).
 
 0.997
Oter_2459
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ade:Adeh_3658 NADH dehydrogenase (quinone).
 
 
 0.996
Oter_2460
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rci:RCIX2387 hydrogenase, membrane subunit 4-like protein (HycC-like).
 
 
 0.996
Oter_2463
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rci:RCIX2384 hydrogenase, membrane subunit 1-like protein (EchA-like).
 
 
 0.996
Oter_2467
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: gme:Gmet_0369 NADH ubiquinone oxidoreductase, 20 kDa subunit.
 
 
0.995
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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