STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_2623PFAM: aldo/keto reductase; KEGG: ade:Adeh_0452 aldo/keto reductase. (347 aa)    
Predicted Functional Partners:
Oter_1282
PFAM: aldo/keto reductase; KEGG: sme:SMb20648 putative oxidoreductase protein.
  
     0.774
Oter_1537
PFAM: aldo/keto reductase; KEGG: rba:RB12019 probable oxidoreductase.
  
     0.768
Oter_0821
PFAM: aldo/keto reductase; KEGG: gtn:GTNG_2361 putative oxidoreductase protein.
  
     0.733
Oter_1422
PFAM: aldo/keto reductase; KEGG: bvu:BVU_0219 putative oxidoreductase.
  
     0.726
Oter_2622
PFAM: homospermidine synthase; KEGG: mbn:Mboo_1047 homospermidine synthase.
       0.678
Oter_2624
PFAM: PAS fold-3 domain protein; SMART: PAS domain containing protein; KEGG: amr:AM1_5107 serine/threonine protein kinase and signal transduction histidine kinase (STHK) with GAF and PAS/PAC sensor.
       0.594
Oter_2621
PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: ppd:Ppro_2844 GreA/GreB family elongation factor.
       0.524
Oter_2620
PFAM: metallophosphoesterase; KEGG: sse:Ssed_3641 metallophosphoesterase.
       0.402
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.