STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_2660KEGG: sus:Acid_3411 hypothetical protein. (247 aa)    
Predicted Functional Partners:
Oter_2659
KEGG: sak:SAK_1076 SatD protein.
 
   
 0.956
Oter_0137
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sus:Acid_3125 redoxin domain protein.
   
 0.705
Oter_0496
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: sus:Acid_5381 redoxin domain protein.
   
 0.689
Oter_1445
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: sru:SRU_2819 thioredoxin, putative.
   
 0.689
Oter_1509
KEGG: sru:SRU_2089 hypothetical protein.
   
 0.689
Oter_1612
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: pat:Patl_0577 redoxin.
   
 0.689
Oter_4061
TIGRFAM: redox-active disulfide protein 2; KEGG: pca:Pcar_0185 putative thioredoxin.
   
 0.689
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
     
 0.540
Oter_4064
KEGG: cps:CPS_2775 hypothetical protein.
  
     0.433
Oter_1160
KEGG: cau:Caur_2458 hypothetical protein.
  
     0.424
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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