STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_2743PFAM: glycoside hydrolase family 9; KEGG: aba:Acid345_2677 glycoside hydrolase, family 9. (863 aa)    
Predicted Functional Partners:
Oter_1089
PFAM: glycoside hydrolase family 5; KEGG: sde:Sde_1572 3-hydroxyacyl-CoA dehydrogenase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.956
Oter_3317
PFAM: glycoside hydrolase family 5; KEGG: cth:Cthe_2807 glycoside hydrolase, family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.951
Oter_0987
PFAM: glycoside hydrolase family 5; KEGG: tma:TM1752 endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.939
Oter_0119
PFAM: glycoside hydrolase family 5; KEGG: csc:Csac_0137 glycoside hydrolase, family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.937
Oter_3093
PFAM: glycoside hydrolase family 5; KEGG: cth:Cthe_2807 glycoside hydrolase, family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.934
Oter_3130
PFAM: glycoside hydrolase family 9; glycoside hydrolase family 9 domain protein Ig domain protein; KEGG: sde:Sde_0558 regulatory protein, LacI.
  
  
  0.928
Oter_2124
KEGG: aba:Acid345_2677 glycoside hydrolase, family 9.
  
  
 
0.915
Oter_1745
Glycosyltransferase 36; PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: scl:sce6460 hypothetical protein.
     
  0.900
Oter_2742
N-acylglucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man).
     0.882
Oter_3714
Mannan endo-1,4-beta-mannosidase; PFAM: glycoside hydrolase family 26; KEGG: cth:Cthe_2811 glycoside hydrolase, family 26; Belongs to the glycosyl hydrolase 26 family.
  
   
 0.726
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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