STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_2767PFAM: glycosyl transferase family 2; KEGG: sal:Sala_2676 glycosyl transferase, family 2. (303 aa)    
Predicted Functional Partners:
Oter_3997
PFAM: glycosyl transferase family 2; KEGG: gsu:GSU3023 glycosyl transferase, group 1/2 family protein.
 
   
0.888
Oter_2768
PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: bvi:Bcep1808_3862 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.808
Oter_2766
PFAM: glycosyl transferase group 1; KEGG: mxa:MXAN_4616 glycosyl transferase family protein.
 
    0.602
Oter_3763
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: mxa:MXAN_2922 bacterial sugar transferase.
 
  
 0.589
Oter_3443
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: cpy:Cphy_3542 undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.563
Oter_2773
PFAM: glycosyl transferase group 1; KEGG: chu:CHU_0894 A-glycosyltransferase, glycosyltransferase family 4 protein.
 
    0.553
Oter_2770
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_2107 ABC transporter related.
 
  
 0.552
Oter_2771
PFAM: ABC-2 type transporter; KEGG: syn:slr0977 putative O-antigen export system permease protein, ABC-2 type transporter permease protein.
 
  
 0.523
Oter_3951
PFAM: glycosyl transferase group 1; KEGG: rsa:RSal33209_1342 glycosyl transferase, group 1 family protein.
 
 
    0.498
Oter_2747
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: dvl:Dvul_2655 sugar transferase.
 
  
 0.481
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.