STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_2820KEGG: ccr:CC_2023 hypothetical protein. (306 aa)    
Predicted Functional Partners:
Oter_1106
KEGG: cya:CYA_1097 trehalose synthase/putative maltokinase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
   
    0.719
Oter_3044
PFAM: protein of unknown function DUF1080; KEGG: sus:Acid_2605 protein of unknown function DUF1080.
 
     0.600
Oter_1017
KEGG: cpy:Cphy_1882 parallel beta-helix repeat.
  
     0.561
Oter_0094
PFAM: protein of unknown function DUF1080; KEGG: ccr:CC_1082 hypothetical protein.
 
     0.535
Oter_2819
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.528
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.510
Oter_1542
PFAM: protein of unknown function DUF6 transmembrane; KEGG: pde:Pden_0925 protein of unknown function DUF6, transmembrane.
  
     0.483
Oter_0116
KEGG: sus:Acid_4275 putative acetyl xylan esterase.
  
    0.480
Oter_0347
PFAM: protein of unknown function DUF1080; KEGG: rba:RB9196 probable secreted glycosyl hydrolase.
  
     0.476
Oter_2062
KEGG: slo:Shew_3555 hypothetical protein.
 
     0.459
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.