STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_2822KEGG: ade:Adeh_2104 hypothetical protein. (393 aa)    
Predicted Functional Partners:
Oter_2821
PFAM: cytochrome c assembly protein; KEGG: ade:Adeh_2103 cytochrome c assembly protein.
  
 0.990
Oter_2588
PFAM: cytochrome c assembly protein; KEGG: afw:Anae109_1713 cytochrome c assembly protein.
  
 0.971
Oter_4406
PFAM: cytochrome c assembly protein; KEGG: afw:Anae109_1713 cytochrome c assembly protein.
  
 0.971
Oter_2823
KEGG: ade:Adeh_2105 hypothetical protein.
       0.785
Oter_2586
KEGG: afw:Anae109_1711 hypothetical protein.
 
     0.784
Oter_3075
KEGG: rba:RB2051 conserved hypothetical protein-putative mucin-like protein.
  
     0.638
Oter_3845
PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: sat:SYN_01607 organic solvent tolerance protein.
 
     0.586
Oter_0842
KEGG: sus:Acid_4177 hypothetical protein.
  
     0.565
Oter_2076
PFAM: cytochrome oxidase assembly; KEGG: sru:SRU_2368 putative cytochrome aa3 oxidase assembly protein, putative CtaA.
  
     0.538
Oter_2824
SMART: CHRD domain containing protein; KEGG: ade:Adeh_3145 CHRD.
 
     0.532
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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