STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_2832PFAM: response regulator receiver; KEGG: ter:Tery_3999 adenylate/guanylate cyclase. (248 aa)    
Predicted Functional Partners:
Oter_3857
PFAM: response regulator receiver; KEGG: csc:Csac_1059 response regulator receiver protein.
  
 
  0.946
Oter_0433
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: sat:SYN_00963 chemotaxis protein.
 
 0.944
Oter_2934
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: pth:PTH_2116 chemotaxis protein histidine kinase and related kinases.
 
 0.944
Oter_3074
PFAM: response regulator receiver; KEGG: rpe:RPE_1192 response regulator receiver protein.
  
  0.925
Oter_2940
PFAM: CheC domain protein; KEGG: mhu:Mhun_2685 CheC, inhibitor of MCP methylation.
  
 
 0.923
Oter_0436
KEGG: ppd:Ppro_3420 hypothetical protein.
   
 0.922
Oter_4092
KEGG: ppd:Ppro_3420 hypothetical protein.
   
 0.922
Oter_1263
PFAM: response regulator receiver; KEGG: rpc:RPC_4677 response regulator receiver domain protein (CheY-like).
  
  
 
0.919
Oter_2939
PFAM: response regulator receiver; KEGG: gur:Gura_0085 two component, sigma-54 specific, transcriptional regulator, fis family.
  
  0.919
Oter_1136
GAF sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bra:BRADO3946 putative sensor histidine kinase with a GAF domain and multiple HAMP and response regulator receiver domains (modular protein).
  
 
 0.917
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.