STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_2891Glutamine--scyllo-inositol transaminase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rca:Rcas_3813 glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family. (412 aa)    
Predicted Functional Partners:
Oter_3443
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: cpy:Cphy_3542 undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.873
Oter_3763
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: mxa:MXAN_2922 bacterial sugar transferase.
 
  
 0.873
Oter_2892
Hypothetical protein.
  
    0.775
Oter_2893
PFAM: Na+/solute symporter; KEGG: vpa:VPA0087 putative transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.774
Oter_2894
PFAM: Heparinase II/III family protein; KEGG: atc:AGR_L_3558 hypothetical protein.
       0.774
Oter_2895
PFAM: ROK family protein; KEGG: tte:TTE0761 transcriptional regulator.
       0.773
Oter_2896
Hypothetical protein; KEGG: cbe:Cbei_3672 dual specificity protein phosphatase.
       0.705
Oter_2897
Hypothetical protein.
       0.705
Oter_3994
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ajs:Ajs_0537 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.702
Oter_2898
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9, prolyl oligopeptidase active site domain protein.
       0.677
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.