STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_2909Hypothetical protein; KEGG: ent:Ent638_1178 purine nucleosidase. (395 aa)    
Predicted Functional Partners:
Oter_2908
PFAM: Na+/solute symporter; KEGG: pat:Patl_0835 SSS sodium solute transporter superfamily; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.692
Oter_2906
KEGG: sus:Acid_0678 hypothetical protein.
       0.485
Oter_2907
PFAM: peptidase M28; KEGG: sus:Acid_2797 peptidase M28.
       0.485
Oter_2904
KEGG: sen:SACE_4826 oxidoreductase domain protein.
     
 0.459
Oter_2905
PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: sus:Acid_0676 glycosyl hydrolase, BNR repeat-containing protein.
       0.457
Oter_2903
PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: sus:Acid_3742 alpha-L-rhamnosidase.
       0.450
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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