STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_2930PFAM: Ferritin Dps family protein; KEGG: fal:FRAAL0786 putative bacterioferritin. (156 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.920
Oter_2686
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: psa:PST_1659 anti-anti-sigma factor, putative.
   
  
 0.824
Oter_0958
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: hch:HCH_00309 signal transduction histidine kinase.
   
  
 0.787
Oter_1220
Conserved hypothetical protein; KEGG: tel:tll1885 unknown protein.
  
 
 0.679
Oter_2979
Conserved hypothetical protein; KEGG: tel:tll1885 unknown protein.
  
 
 0.679
Oter_4362
Conserved hypothetical protein; KEGG: tel:tll1885 unknown protein.
  
 
 0.679
Oter_4382
Conserved hypothetical protein; KEGG: tel:tll1885 unknown protein.
  
 
 0.679
Oter_1001
PFAM: conserved hypothetical protein; KEGG: psa:PST_3106 NAD-dependent aldehyde dehydrogenase.
   
  
 0.608
Oter_4346
KEGG: noc:Noc_1592 hypothetical protein.
   
  
 0.608
Oter_0946
KEGG: noc:Noc_1756 PAS sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
   
  
 0.568
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.