STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_2939PFAM: response regulator receiver; KEGG: gur:Gura_0085 two component, sigma-54 specific, transcriptional regulator, fis family. (125 aa)    
Predicted Functional Partners:
Oter_2940
PFAM: CheC domain protein; KEGG: mhu:Mhun_2685 CheC, inhibitor of MCP methylation.
 
 
 0.985
Oter_2934
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: pth:PTH_2116 chemotaxis protein histidine kinase and related kinases.
 
 0.983
Oter_2837
PFAM: response regulator receiver; KEGG: ccr:CC_0437 chemotaxis protein CheYII.
  
  
  0.962
Oter_0433
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: sat:SYN_00963 chemotaxis protein.
  
 0.940
Oter_0411
TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: pth:PTH_2060 flagellum motor switch protein.
  
 
 0.939
Oter_3857
PFAM: response regulator receiver; KEGG: csc:Csac_1059 response regulator receiver protein.
  
 
 
0.929
Oter_1263
PFAM: response regulator receiver; KEGG: rpc:RPC_4677 response regulator receiver domain protein (CheY-like).
  
 
0.928
Oter_2936
PFAM: chemotaxis sensory transducer; KEGG: mxa:MXAN_6962 methyl-accepting chemotaxis protein.
  
 
  0.926
Oter_2832
PFAM: response regulator receiver; KEGG: ter:Tery_3999 adenylate/guanylate cyclase.
  
  0.919
Oter_3074
PFAM: response regulator receiver; KEGG: rpe:RPE_1192 response regulator receiver protein.
  
 
 
0.919
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.