STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_3007KEGG: ppf:Pput_0033 hypothetical protein. (311 aa)    
Predicted Functional Partners:
Oter_2686
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: psa:PST_1659 anti-anti-sigma factor, putative.
  
 
 0.995
Oter_0391
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: mta:Moth_0746 flagellar hook-associated protein FlgK.
   
    0.950
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.950
Oter_0401
PFAM: MotA/TolQ/ExbB proton channel; KEGG: maq:Maqu_2779 flagellar motor component.
   
    0.950
Oter_0417
KEGG: mgm:Mmc1_0058 hypothetical protein.
   
    0.950
Oter_0423
PFAM: flagellar motor switch protein FliG; KEGG: tma:TM0220 flagellar motor switch protein G.
   
    0.950
Oter_0427
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.950
Oter_2835
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator.
  
  
 0.885
Oter_4246
Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two component regulator propeller; Two component regulator three Y domain protein; KEGG: xcb:XC_1260 histidine kinase/response regulator hybrid protein.
  
  
 0.885
Oter_3094
KEGG: gme:Gmet_2818 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: protein phosphatase 2C domain protein.
  
 
 0.875
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.