STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_3216KEGG: nar:Saro_1725 hypothetical protein. (317 aa)    
Predicted Functional Partners:
Oter_1961
Beta-ketoacyl synthase; PFAM: AMP-dependent synthetase and ligase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Male sterility domain; KR domain protein; Beta-ketoacyl synthase; KEGG: ava:Ava_4108 beta-ketoacyl synthase.
  
 
 0.892
Oter_3215
PFAM: protein of unknown function DUF1593; KEGG: ccr:CC_0505 hypothetical protein.
 
     0.708
Oter_3210
PFAM: protein of unknown function DUF303 acetylesterase putative; glycoside hydrolase family 2 sugar binding; KEGG: sus:Acid_2104 protein of unknown function DUF303, acetylesterase putative.
 
   
 0.654
Oter_3214
PFAM: protein of unknown function DUF1680; KEGG: sde:Sde_0778 acetyl-CoA carboxylase, biotin carboxylase.
 
     0.638
Oter_3217
KEGG: ccr:CC_0796 alpha-glucosidase, putative.
       0.619
Oter_3218
Alpha-L-fucosidase; KEGG: mgr:MGG_03257 hypothetical protein; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); Carbohydrate binding family 6; SMART: cellulose binding type IV.
       0.618
Oter_1337
PFAM: protein of unknown function DUF303 acetylesterase putative; glycoside hydrolase family 2 sugar binding; KEGG: bfr:BF3493 sialic acid-specific 9-O-acetylesterase.
  
   
 0.602
Oter_3222
PFAM: putative esterase; glycoside hydrolase family 13 domain protein; KEGG: sus:Acid_4464 putative esterase.
     0.550
Oter_0134
KEGG: rba:RB9146 hypothetical protein.
  
     0.545
Oter_3219
Beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: cbe:Cbei_4974 glycoside hydrolase, family 3 domain protein.
       0.544
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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