STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_3247PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rsp:RSP_0522 putative oxidoreductase. (365 aa)    
Predicted Functional Partners:
Oter_3248
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: mca:MCA0612 UDP-glucose 4-epimerase.
 
    0.876
Oter_2482
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Xylose isomerase domain protein TIM barrel; KEGG: rca:Rcas_4405 oxidoreductase domain protein.
  
    0.829
Oter_0898
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rba:RB6199 dehydrogenase homolog.
  
     0.772
Oter_1517
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mlo:mlr6441 similar to oxidoreductase.
  
     0.767
Oter_3507
PFAM: oxidoreductase domain protein; KEGG: pdi:BDI_2047 putative NADH-dependent dyhydrogenase.
  
     0.745
Oter_0338
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: atc:AGR_pAT_7 hypothetical protein.
  
     0.744
Oter_1792
PFAM: oxidoreductase domain protein; KEGG: rba:RB5365 probable NADH-dependent dehydrogenase.
  
     0.743
Oter_3509
PFAM: oxidoreductase domain protein; KEGG: sus:Acid_7008 oxidoreductase domain protein.
  
     0.742
Oter_0114
PFAM: oxidoreductase domain protein; KEGG: rrs:RoseRS_1636 oxidoreductase domain protein.
  
     0.733
Oter_4517
PFAM: oxidoreductase domain protein; KEGG: pdi:BDI_2644 putative oxidoreductase.
  
     0.688
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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