STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_3259PFAM: glycosyl transferase group 1; KEGG: amr:AM1_0377 glycosyl transferase, group 1. (395 aa)    
Predicted Functional Partners:
Oter_3258
PFAM: glycosyl transferase group 1; KEGG: amr:AM1_0379 glycosyl transferase, group 1 family protein, putative.
 
     0.927
Oter_3257
KEGG: chu:CHU_0891 hypothetical protein.
 
     0.921
Oter_3256
PFAM: glycosyl transferase group 1; KEGG: ana:alr5237 probable glycosyl transferase.
 
     0.916
Oter_3271
PFAM: glycosyl transferase group 1; KEGG: rme:Rmet_5856 glycosyl transferase, group 1.
 
     0.908
Oter_3261
PFAM: glycosyl transferase group 1; KEGG: acr:Acry_1302 glycosyl transferase, group 1.
 
     0.867
Oter_2752
PFAM: transferase hexapeptide repeat containing protein; KEGG: esa:ESA_01164 hypothetical protein.
  
 0.783
Oter_3260
KEGG: ana:all3270 unknown protein.
  
   0.776
Oter_3262
KEGG: rxy:Rxyl_3094 hypothetical protein.
  
    0.776
Oter_2748
PFAM: glycosyl transferase group 1; KEGG: mca:MCA1168 colanic acid biosynthesis glycosyl transferase, putative.
  
     0.672
Oter_3266
PFAM: glycosyl transferase family 2; KEGG: ava:Ava_3875 glycosyl transferase, family 2.
 
    0.649
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.