STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_3546KEGG: sen:SACE_5146 Mn2+ and Fe2+ transporters of the NRAMP family-like protein. (453 aa)    
Predicted Functional Partners:
Oter_0116
KEGG: sus:Acid_4275 putative acetyl xylan esterase.
  
     0.543
hemL
TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: gme:Gmet_3356 glutamate-1-semialdehyde-2,1-aminomutase.
       0.527
Oter_2671
KEGG: scl:sce8243 fumarylacetoacetase family protein.
  
     0.484
Oter_3295
PFAM: putative esterase; SMP-30/Gluconolaconase/LRE domain protein; KEGG: sus:Acid_3430 SMP-30/gluconolaconase/LRE domain protein.
  
    0.444
Oter_3548
KEGG: aba:Acid345_3562 hypothetical protein.
       0.429
Oter_4328
Hypothetical protein; KEGG: sus:Acid_2664 lipolytic enzyme, G-D-S-L family.
  
     0.404
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.