STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_3655PFAM: beta-lactamase domain protein; KEGG: gtn:GTNG_2378 hydroxyacylglutathione hydrolase. (211 aa)    
Predicted Functional Partners:
Oter_1979
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bmu:Bmul_0593 lactoylglutathione lyase.
  
  
 0.912
Oter_1250
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: baa:BA_3720 glyoxalase/bleomycin resistance protein/dioxygenase superfamily.
     
 0.900
Oter_1372
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mxa:MXAN_0496 glyoxalase family protein.
     
  0.900
Oter_2573
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mlr5077 hypothetical protein.
     
 0.900
Oter_3654
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.518
Oter_1961
Beta-ketoacyl synthase; PFAM: AMP-dependent synthetase and ligase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Male sterility domain; KR domain protein; Beta-ketoacyl synthase; KEGG: ava:Ava_4108 beta-ketoacyl synthase.
   
 
 0.512
Oter_3656
KEGG: dsy:DSY3153 hypothetical protein.
       0.507
Oter_3657
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: dsy:DSY3150 hypothetical protein.
       0.507
Oter_2142
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nmu:Nmul_A0355 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
   
 0.502
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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