STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_3728PFAM: TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: bld:BLi01940 potassium/proton antiporter. (496 aa)    
Predicted Functional Partners:
Oter_3727
KEGG: mxa:MXAN_2517 hypothetical protein.
       0.515
Oter_4574
PFAM: TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: ppu:PP_5355 sodium/proton antiporter, putative.
     
 0.500
Oter_4597
PFAM: TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: bxe:Bxe_A0953 Na+/H+ antiporter, CPA2 family.
     
 0.500
Oter_3729
Alkylhydroperoxidase like protein, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
     
 0.458
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.