STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_3748PFAM: Septum formation initiator; KEGG: mxa:MXAN_3704 cell division protein FtsB. (123 aa)    
Predicted Functional Partners:
Oter_2639
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
   
 
 0.933
Oter_3747
2-alkenal reductase; PFAM: UTP--glucose-1-phosphate uridylyltransferase; KEGG: rba:RB6977 UDP-N-acetylhexosamine pyrophosphorylase.
       0.762
Oter_3749
PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: gsu:GSU1537 general secretion pathway protein-related protein.
       0.518
Oter_3746
PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: gka:GK0570 phosphomannomutase.
  
    0.478
Oter_2988
PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ppd:Ppro_3589 PpiC-type peptidyl-prolyl cis-trans isomerase.
  
  
 0.433
Oter_3750
KEGG: dre:100006405 hypothetical protein LOC100006405.
       0.430
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.