Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Oter_1006 | Oter_3907 | Oter_1006 | Oter_3907 | TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: LmbE family protein; glucosamine/galactosamine-6-phosphate isomerase; KEGG: chu:CHU_1660 glucosamine-6-phosphate deaminase-like protein. | Hypothetical protein; KEGG: rrs:RoseRS_2561 glucose-6-P dehydrogenase subunit-like protein. | 0.412 |
Oter_1006 | zwf | Oter_1006 | Oter_3908 | TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: LmbE family protein; glucosamine/galactosamine-6-phosphate isomerase; KEGG: chu:CHU_1660 glucosamine-6-phosphate deaminase-like protein. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.894 |
Oter_3907 | Oter_1006 | Oter_3907 | Oter_1006 | Hypothetical protein; KEGG: rrs:RoseRS_2561 glucose-6-P dehydrogenase subunit-like protein. | TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: LmbE family protein; glucosamine/galactosamine-6-phosphate isomerase; KEGG: chu:CHU_1660 glucosamine-6-phosphate deaminase-like protein. | 0.412 |
Oter_3907 | nadK | Oter_3907 | Oter_2370 | Hypothetical protein; KEGG: rrs:RoseRS_2561 glucose-6-P dehydrogenase subunit-like protein. | ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.499 |
Oter_3907 | zwf | Oter_3907 | Oter_3908 | Hypothetical protein; KEGG: rrs:RoseRS_2561 glucose-6-P dehydrogenase subunit-like protein. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.706 |
nadK | Oter_3907 | Oter_2370 | Oter_3907 | ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | Hypothetical protein; KEGG: rrs:RoseRS_2561 glucose-6-P dehydrogenase subunit-like protein. | 0.499 |
nadK | zwf | Oter_2370 | Oter_3908 | ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.597 |
zwf | Oter_1006 | Oter_3908 | Oter_1006 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: LmbE family protein; glucosamine/galactosamine-6-phosphate isomerase; KEGG: chu:CHU_1660 glucosamine-6-phosphate deaminase-like protein. | 0.894 |
zwf | Oter_3907 | Oter_3908 | Oter_3907 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | Hypothetical protein; KEGG: rrs:RoseRS_2561 glucose-6-P dehydrogenase subunit-like protein. | 0.706 |
zwf | nadK | Oter_3908 | Oter_2370 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.597 |