STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zwfGlucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (512 aa)    
Predicted Functional Partners:
Oter_0758
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
 
 0.997
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: gme:Gmet_2458 glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.976
Oter_2139
6-phosphogluconolactonase; KEGG: sus:Acid_6335 hypothetical protein.
    
 0.917
Oter_3827
Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: tcr:506943.50 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 0.917
Oter_4109
6-phosphogluconolactonase; KEGG: sus:Acid_6335 hypothetical protein.
    
 0.917
Oter_1006
TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: LmbE family protein; glucosamine/galactosamine-6-phosphate isomerase; KEGG: chu:CHU_1660 glucosamine-6-phosphate deaminase-like protein.
  
  
 0.894
Oter_1561
KEGG: rba:RB10277 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family.
  
 
 0.880
gpmI
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
 
 0.859
Oter_0069
PFAM: ROK family protein; KEGG: asa:ASA_3376 ROK family protein.
  
 
 0.849
Oter_2895
PFAM: ROK family protein; KEGG: tte:TTE0761 transcriptional regulator.
  
 
 0.849
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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