STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_4064KEGG: cps:CPS_2775 hypothetical protein. (121 aa)    
Predicted Functional Partners:
Oter_2178
KEGG: sus:Acid_6612 hypothetical protein.
   
    0.755
Oter_3583
PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: pat:Patl_2421 xanthine/uracil/vitamin C permease.
   
    0.755
Oter_3145
KEGG: gme:Gmet_2836 hypothetical protein.
  
     0.635
Oter_0824
KEGG: pgi:PG0165 heat shock protein 15.
  
     0.613
Oter_3730
KEGG: aba:Acid345_2640 hypothetical protein.
 
     0.603
Oter_2611
PFAM: LmbE family protein; KEGG: mxa:MXAN_6192 hypothetical protein.
  
     0.598
Oter_4065
KEGG: pde:Pden_3320 von Willebrand factor, type A.
       0.580
Oter_2609
PFAM: Na+/solute symporter; KEGG: mxa:MXAN_6190 transporter, solute:sodium symporter (SSS) family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.514
Oter_3878
KEGG: rba:RB7682 hypothetical protein.
  
     0.499
Oter_4063
PFAM: regulatory protein ArsR; KEGG: dde:Dde_3721 putative transcriptional regulator, ArsR family.
       0.470
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.