STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_4103PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cbd:COXBU7E912_1554 glyoxalase family protein. (130 aa)    
Predicted Functional Partners:
Oter_2062
KEGG: slo:Shew_3555 hypothetical protein.
  
     0.724
Oter_2645
KEGG: saz:Sama_0725 hypothetical protein.
  
     0.694
Oter_4102
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sil:SPO3081 glyoxalase family protein.
  
  
 0.592
Oter_4104
PFAM: Helix-turn-helix type 11 domain protein; KEGG: bcz:BCZK1001 hypothetical protein.
  
    0.588
Oter_4546
Hypothetical protein; KEGG: sus:Acid_6877 fibronectin, type III domain protein.
  
     0.574
Oter_0734
KEGG: aba:Acid345_0528 hypothetical protein.
  
     0.473
Oter_1134
PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mca:MCA2048 oxidoreductase, Gfo/Idh/MocA family.
 
     0.418
Oter_1154
PFAM: Ig family protein; Two component regulator propeller; KEGG: fjo:Fjoh_0804 hypothetical protein.
  
     0.417
Oter_1380
KEGG: gur:Gura_3207 hypothetical protein.
  
     0.415
Oter_0733
PFAM: DoxX family protein; KEGG: aba:Acid345_0529 DoxX.
  
    0.406
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.