STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_4346KEGG: noc:Noc_1592 hypothetical protein. (329 aa)    
Predicted Functional Partners:
Oter_4347
KEGG: noc:Noc_1591 protein of unknown function DUF1469.
  
    0.784
Oter_4348
KEGG: mlo:mlr9697 hypothetical protein.
  
    0.777
Oter_2686
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: psa:PST_1659 anti-anti-sigma factor, putative.
   
  
 0.699
Oter_4345
PFAM: ribonuclease BN; KEGG: noc:Noc_1073 ribonuclease BN.
  
    0.615
Oter_2930
PFAM: Ferritin Dps family protein; KEGG: fal:FRAAL0786 putative bacterioferritin.
   
  
 0.608
Oter_0623
PFAM: membrane-flanked domain; KEGG: mxa:MXAN_0624 hypothetical protein.
  
    0.436
Oter_0624
PFAM: membrane-flanked domain; KEGG: mxa:MXAN_0623 hypothetical protein.
  
    0.436
Oter_2015
KEGG: maq:Maqu_4056 hypothetical protein.
  
    0.436
Oter_3114
PFAM: CsbD family protein; KEGG: gur:Gura_2405 CsbD family protein.
  
  
 0.426
Oter_4349
PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: syr:SynRCC307_1923 superfamily II RNA helicase.
       0.419
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.