STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_4413KEGG: fjo:Fjoh_3073 hypothetical protein. (179 aa)    
Predicted Functional Partners:
Oter_1219
PFAM: Heavy metal transport/detoxification protein; KEGG: gfo:GFO_1128 MerT-like protein containing heavy metal transport/detoxification domain.
  
     0.686
Oter_2980
PFAM: Heavy metal transport/detoxification protein; KEGG: gfo:GFO_1128 MerT-like protein containing heavy metal transport/detoxification domain.
  
     0.686
Oter_4361
PFAM: Heavy metal transport/detoxification protein; KEGG: gfo:GFO_1128 MerT-like protein containing heavy metal transport/detoxification domain.
  
     0.686
Oter_4383
PFAM: Heavy metal transport/detoxification protein; KEGG: gfo:GFO_1128 MerT-like protein containing heavy metal transport/detoxification domain.
  
     0.686
Oter_4412
Hypothetical protein.
       0.532
Oter_2967
PFAM: outer membrane efflux protein; KEGG: ade:Adeh_4106 outer membrane efflux protein.
  
   0.493
Oter_4441
PFAM: outer membrane efflux protein; KEGG: rme:Rmet_4120 outer membrane efflux protein.
  
   0.447
Oter_2611
PFAM: LmbE family protein; KEGG: mxa:MXAN_6192 hypothetical protein.
  
     0.442
Oter_4443
TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: xau:Xaut_3984 heavy metal efflux pump, CzcA family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.442
Oter_2969
TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: abo:ABO_1377 cobalt/zinc/cadmium efflux RND transporter,permease protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.438
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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