STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_4489Hypothetical protein. (80 aa)    
Predicted Functional Partners:
Oter_4490
Hypothetical protein; KEGG: mes:Meso_0503 TrbL/VirB6 plasmid conjugal transfer protein.
       0.762
Oter_4491
Hypothetical protein.
       0.762
Oter_4492
Hypothetical protein.
       0.639
Oter_4487
Hypothetical protein; KEGG: xcb:XC_3205 TonB-dependent receptor.
       0.625
Oter_4488
Hypothetical protein; KEGG: bpt:Bpet4621 conjugal transfer protein TrbJ.
       0.625
Oter_4493
Hypothetical protein.
       0.618
Oter_4494
Hypothetical protein; KEGG: ade:Adeh_3248 serine/threonine protein kinase.
       0.618
Oter_4495
KEGG: mkm:Mkms_5935 hypothetical protein.
       0.618
Oter_4496
ATPase AAA-2 domain protein; PFAM: ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: prw:PsycPRwf_0876 ATPase AAA-2 domain protein.
       0.618
Oter_4497
PFAM: regulatory protein LuxR; KEGG: sfu:Sfum_1664 two component transcriptional regulator, LuxR family.
       0.594
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.