STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_4591Protein of unknown function DUF147; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; protein of unknown function DUF147; KEGG: afw:Anae109_1308 protein of unknown function DUF147. (446 aa)    
Predicted Functional Partners:
Oter_3746
PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: gka:GK0570 phosphomannomutase.
 
 
 0.777
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
 
 0.718
Oter_0090
KEGG: cyb:CYB_1660 lipoprotein, putative.
  
     0.676
Oter_3845
PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: sat:SYN_01607 organic solvent tolerance protein.
 
     0.670
Oter_0628
PFAM: Peptidoglycan-binding LysM; KEGG: sme:SMc04018 probable 5'-nucleotidase precursor (signal peptide) protein.
 
 
   0.666
Oter_3143
PFAM: PfkB domain protein; KEGG: sco:SCO4283 putative sugar kinase.
 
  
 0.660
Oter_2586
KEGG: afw:Anae109_1711 hypothetical protein.
  
     0.606
Oter_2563
Hypothetical protein; KEGG: eba:ebA6665 PpiC-type peptidyl-prolyl cis-trans isomerase.
 
     0.597
Oter_4592
NADH-ubiquinone/plastoquinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.
     
 0.591
Oter_2843
PFAM: Peptidoglycan-binding LysM; KEGG: ooe:OEOE_1199 muramidase with LysM repeats.
 
    0.589
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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