STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnec_1039PFAM: High potential iron-sulfur protein; Ergtoxin; KEGG: pnu:Pnuc_0296 high potential iron-sulfur protein. (102 aa)    
Predicted Functional Partners:
Pnec_1038
Hypothetical protein.
       0.603
Pnec_1287
KEGG: pnu:Pnuc_0515 putative transmembrane protein.
  
     0.597
Pnec_1037
PFAM: cytochrome c class I; KEGG: pnu:Pnuc_0802 cytochrome c, class I.
     
 0.463
Pnec_0034
PFAM: GCN5-related N-acetyltransferase; KEGG: pnu:Pnuc_0038 GCN5-related N-acetyltransferase.
  
     0.449
Pnec_0694
KEGG: pnu:Pnuc_1257 putative transmembrane protein.
  
     0.445
Pnec_0247
KEGG: pnu:Pnuc_0225 hypothetical protein.
  
     0.443
Your Current Organism:
Polynucleobacter necessarius
NCBI taxonomy Id: 452638
Other names: P. necessarius STIR1, Polynucleobacter necessarius STIR1, Polynucleobacter necessarius subsp. necessarius STIR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.