Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Pnec_1012 | Pnec_1272 | TIGRFAM: cation diffusion facilitator family transporter; PFAM: alpha/beta hydrolase fold; cation efflux protein; KEGG: pnu:Pnuc_0827 cation diffusion facilitator family transporter. | Carboxylesterase; PFAM: phospholipase/Carboxylesterase; KEGG: pnu:Pnuc_0531 phospholipase/carboxylesterase. | 0.495 |
Pnec_1270 | Pnec_1271 | PFAM: sodium:dicarboxylate symporter; KEGG: pnu:Pnuc_1745 sodium:dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | KEGG: reh:H16_A1371 hypothetical membrane spanning protein. | 0.529 |
Pnec_1270 | Pnec_1272 | PFAM: sodium:dicarboxylate symporter; KEGG: pnu:Pnuc_1745 sodium:dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Carboxylesterase; PFAM: phospholipase/Carboxylesterase; KEGG: pnu:Pnuc_0531 phospholipase/carboxylesterase. | 0.479 |
Pnec_1271 | Pnec_1270 | KEGG: reh:H16_A1371 hypothetical membrane spanning protein. | PFAM: sodium:dicarboxylate symporter; KEGG: pnu:Pnuc_1745 sodium:dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.529 |
Pnec_1271 | Pnec_1272 | KEGG: reh:H16_A1371 hypothetical membrane spanning protein. | Carboxylesterase; PFAM: phospholipase/Carboxylesterase; KEGG: pnu:Pnuc_0531 phospholipase/carboxylesterase. | 0.683 |
Pnec_1272 | Pnec_1012 | Carboxylesterase; PFAM: phospholipase/Carboxylesterase; KEGG: pnu:Pnuc_0531 phospholipase/carboxylesterase. | TIGRFAM: cation diffusion facilitator family transporter; PFAM: alpha/beta hydrolase fold; cation efflux protein; KEGG: pnu:Pnuc_0827 cation diffusion facilitator family transporter. | 0.495 |
Pnec_1272 | Pnec_1270 | Carboxylesterase; PFAM: phospholipase/Carboxylesterase; KEGG: pnu:Pnuc_0531 phospholipase/carboxylesterase. | PFAM: sodium:dicarboxylate symporter; KEGG: pnu:Pnuc_1745 sodium:dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.479 |
Pnec_1272 | Pnec_1271 | Carboxylesterase; PFAM: phospholipase/Carboxylesterase; KEGG: pnu:Pnuc_0531 phospholipase/carboxylesterase. | KEGG: reh:H16_A1371 hypothetical membrane spanning protein. | 0.683 |