STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR54WD repeat domain 54. (334 aa)    
Predicted Functional Partners:
ENSNVIP00000016160
Organic solute carrier partner 1.
   
   0.880
WDR53
WD repeat domain 53.
      
 0.753
CD99L2
CD99 molecule like 2.
      
 0.614
TMEM104
Transmembrane protein 104.
      
 0.578
ITPRIPL1
ITPRIP like 1.
      
 0.568
NAT9
N-acetyltransferase 9 (putative).
      
 0.534
ZCRB1
Zinc finger CCHC-type and RNA binding motif containing 1.
      
 0.491
FAAP100
FA core complex associated protein 100.
      
 0.470
WDR83
WD repeat domain 83.
      
 0.457
DBN1
Drebrin 1.
      
 0.451
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.