Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000001057General transcription factor IIF subunit 2. (249 aa)    
Predicted Functional Partners:
GTF2F1
General transcription factor IIF subunit 1.
   
 0.999
POLR2E
RNA polymerase II subunit E.
   
 0.990
GTF2E2
General transcription factor IIE subunit 2.
   
 0.984
GTF2E1
General transcription factor IIE subunit 1.
   
 0.980
POLR2I
RNA polymerase II subunit I.
   
 0.977
ENSNVIP00000004186
annotation not available
    
 0.975
CTDP1
CTD phosphatase subunit 1.
    
 0.975
POLR2B
RNA polymerase II subunit B.
    
 0.975
ENSNVIP00000026782
RNA polymerase II subunit G.
    
 0.975
ENSNVIP00000019589
RNA polymerase II subunit C.
    
 0.972
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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