ENSNVIP00000001070 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNVIP00000001070

annotation not available (463 aa)

Predicted Functional Partners:

ENSNVIP00000004186

0.987

ENSNVIP00000026782

0.981

POLR2I

0.966

ENSNVIP00000019589

0.963

POLR2B

0.939

RECQL5

0.937

RPAP2

0.937

ENSNVIP00000024437

0.935

ENSNVIP00000030484

0.935

ENSNVIP00000007932

0.928

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNVIP00000001070	ENSNVIP00000004186	ENSNVIP00000001070	ENSNVIP00000004186	annotation not available	annotation not available	0.987
ENSNVIP00000001070	ENSNVIP00000007932	ENSNVIP00000001070	ENSNVIP00000007932	annotation not available	annotation not available	0.928
ENSNVIP00000001070	ENSNVIP00000019589	ENSNVIP00000001070	ENSNVIP00000019589	annotation not available	RNA polymerase II subunit C.	0.963
ENSNVIP00000001070	ENSNVIP00000024437	ENSNVIP00000001070	ENSNVIP00000024437	annotation not available	annotation not available	0.935
ENSNVIP00000001070	ENSNVIP00000026782	ENSNVIP00000001070	ENSNVIP00000026782	annotation not available	RNA polymerase II subunit G.	0.981
ENSNVIP00000001070	ENSNVIP00000030484	ENSNVIP00000001070	ENSNVIP00000030484	annotation not available	annotation not available	0.935
ENSNVIP00000001070	POLR2B	ENSNVIP00000001070	ENSNVIP00000019666	annotation not available	RNA polymerase II subunit B.	0.939
ENSNVIP00000001070	POLR2I	ENSNVIP00000001070	ENSNVIP00000020755	annotation not available	RNA polymerase II subunit I.	0.966
ENSNVIP00000001070	RECQL5	ENSNVIP00000001070	ENSNVIP00000014133	annotation not available	RecQ like helicase 5.	0.937
ENSNVIP00000001070	RPAP2	ENSNVIP00000001070	ENSNVIP00000023706	annotation not available	RNA polymerase II associated protein 2.	0.937
ENSNVIP00000004186	ENSNVIP00000001070	ENSNVIP00000004186	ENSNVIP00000001070	annotation not available	annotation not available	0.987
ENSNVIP00000004186	ENSNVIP00000007932	ENSNVIP00000004186	ENSNVIP00000007932	annotation not available	annotation not available	0.988
ENSNVIP00000004186	ENSNVIP00000019589	ENSNVIP00000004186	ENSNVIP00000019589	annotation not available	RNA polymerase II subunit C.	0.998
ENSNVIP00000004186	ENSNVIP00000024437	ENSNVIP00000004186	ENSNVIP00000024437	annotation not available	annotation not available	0.980
ENSNVIP00000004186	ENSNVIP00000026782	ENSNVIP00000004186	ENSNVIP00000026782	annotation not available	RNA polymerase II subunit G.	0.999
ENSNVIP00000004186	ENSNVIP00000030484	ENSNVIP00000004186	ENSNVIP00000030484	annotation not available	annotation not available	0.980
ENSNVIP00000004186	POLR2B	ENSNVIP00000004186	ENSNVIP00000019666	annotation not available	RNA polymerase II subunit B.	0.999
ENSNVIP00000004186	POLR2I	ENSNVIP00000004186	ENSNVIP00000020755	annotation not available	RNA polymerase II subunit I.	0.998
ENSNVIP00000004186	RECQL5	ENSNVIP00000004186	ENSNVIP00000014133	annotation not available	RecQ like helicase 5.	0.943
ENSNVIP00000004186	RPAP2	ENSNVIP00000004186	ENSNVIP00000023706	annotation not available	RNA polymerase II associated protein 2.	0.970