Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MEPCEMethylphosphate capping enzyme. (694 aa)    
Predicted Functional Partners:
LARP7
La ribonucleoprotein 7, transcriptional regulator.
   
 0.991
CDK9
Cyclin dependent kinase 9.
    
 
 0.980
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
    
 
 0.974
HEXIM1
HEXIM P-TEFb complex subunit 1.
    
 0.963
PRPF3
pre-mRNA processing factor 3.
    
   0.937
HEXIM2
HEXIM P-TEFb complex subunit 2.
    
 
 0.933
PRPF31
pre-mRNA processing factor 31.
    
   0.878
CCNT1
Cyclin T1.
    
 
 0.875
LSM5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
   0.870
ENSNVIP00000011129
annotation not available
    
   0.868
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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