STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000001101Branched chain amino acid transaminase 1. (398 aa)    
Predicted Functional Partners:
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
  
 0.905
SDS
Serine dehydratase.
  
 0.900
ENSNVIP00000016318
annotation not available
  
 
 0.896
SDSL
Serine dehydratase like.
  
 0.896
AGXT2
Alanine--glyoxylate aminotransferase 2.
   
 
 0.871
CTH
Cystathionine gamma-lyase.
   
 0.869
HMGCLL1
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1.
  
 0.839
HMGCL
3-hydroxy-3-methylglutaryl-CoA lyase.
  
 0.839
ENSNVIP00000024305
Glutamate-cysteine ligase modifier subunit.
   
 0.835
GCLC
Glutamate-cysteine ligase catalytic subunit.
     
 0.822
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.