STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000001104Rhomboid domain containing 1. (316 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
    
 
 0.891
KLHL31
Kelch like family member 31.
      
 0.739
TMEM70
Transmembrane protein 70.
      
 0.705
TMEM214
Transmembrane protein 214.
      
 0.697
TMEM38A
Transmembrane protein 38A.
      
 0.665
POPDC2
Popeye domain containing 2.
    
 
 0.660
SPATA5
Spermatogenesis associated 5.
    
 
 0.610
SPATA5L1
Spermatogenesis associated 5 like 1.
    
 
 0.610
SAE1
SUMO1 activating enzyme subunit 1.
      
 0.609
ENSNVIP00000031989
Cell division cycle associated 3.
      
 0.556
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.