Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YIPF2Yip1 domain family member 2. (314 aa)    
Predicted Functional Partners:
YIPF6
Yip1 domain family member 6.
   
 
 0.935
YIPF4
Yip1 domain family member 4.
   
 
 0.793
YIPF5
Yip1 domain family member 5.
   
 
 0.763
YIPF7
Yip1 domain family member 7.
   
 
 0.729
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
   
  
 0.685
SELENOS
Selenoprotein S.
   
 
 0.659
ENSNVIP00000013937
annotation not available
   
 
 0.651
CDRT4
CMT1A duplicated region transcript 4.
   
 
 0.651
TVP23A
Trans-golgi network vesicle protein 23 homolog A.
   
 
 0.651
YIPF3
Yip1 domain family member 3.
   
  
 0.563
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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