STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHF8PHD finger protein 8. (1060 aa)    
Predicted Functional Partners:
TOPBP1
DNA topoisomerase II binding protein 1.
    
 
 0.847
CCNA2
Cyclin A2.
    
 0.841
ZNF711
Zinc finger protein 711.
   
 0.723
NCAPG2
non-SMC condensin II complex subunit G2.
   
 
 0.693
ARID5B
AT-rich interaction domain 5B.
    
 0.691
NCAPD3
non-SMC condensin II complex subunit D3.
   
 
 0.690
SUV39H1
Suppressor of variegation 3-9 homolog 1.
    
 0.678
SUV39H2
Suppressor of variegation 3-9 homolog 2.
    
 0.678
FAM120C
Family with sequence similarity 120C.
   
  
 0.586
PHF2
PHD finger protein 2.
   
 
  0.561
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.