PAM16 protein (Neovison vison) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

PAM16

Presequence translocase associated motor 16. (144 aa)

Predicted Functional Partners:

ENSNVIP00000010454

0.974

ENSNVIP00000012372

0.974

ENSNVIP00000006339

0.973

TIMM44

0.973

TIMM50

0.961

DNAJC15

0.950

ENSNVIP00000021199

0.947

TIMM17A

0.943

TIMM17B

0.936

TIMM21

0.907

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DNAJC15	ENSNVIP00000006339	ENSNVIP00000001295	ENSNVIP00000006339	DnaJ heat shock protein family (Hsp40) member C15.	annotation not available	0.857
DNAJC15	ENSNVIP00000010454	ENSNVIP00000001295	ENSNVIP00000010454	DnaJ heat shock protein family (Hsp40) member C15.	annotation not available	0.569
DNAJC15	ENSNVIP00000012372	ENSNVIP00000001295	ENSNVIP00000012372	DnaJ heat shock protein family (Hsp40) member C15.	annotation not available	0.580
DNAJC15	PAM16	ENSNVIP00000001295	ENSNVIP00000001136	DnaJ heat shock protein family (Hsp40) member C15.	Presequence translocase associated motor 16.	0.950
DNAJC15	TIMM17A	ENSNVIP00000001295	ENSNVIP00000018521	DnaJ heat shock protein family (Hsp40) member C15.	Translocase of inner mitochondrial membrane 17A.	0.846
DNAJC15	TIMM17B	ENSNVIP00000001295	ENSNVIP00000008571	DnaJ heat shock protein family (Hsp40) member C15.	Translocase of inner mitochondrial membrane 17B.	0.852
DNAJC15	TIMM21	ENSNVIP00000001295	ENSNVIP00000014954	DnaJ heat shock protein family (Hsp40) member C15.	Translocase of inner mitochondrial membrane 21.	0.814
DNAJC15	TIMM44	ENSNVIP00000001295	ENSNVIP00000022709	DnaJ heat shock protein family (Hsp40) member C15.	Translocase of inner mitochondrial membrane 44.	0.872
DNAJC15	TIMM50	ENSNVIP00000001295	ENSNVIP00000013635	DnaJ heat shock protein family (Hsp40) member C15.	Translocase of inner mitochondrial membrane 50.	0.740
ENSNVIP00000006339	DNAJC15	ENSNVIP00000006339	ENSNVIP00000001295	annotation not available	DnaJ heat shock protein family (Hsp40) member C15.	0.857
ENSNVIP00000006339	ENSNVIP00000010454	ENSNVIP00000006339	ENSNVIP00000010454	annotation not available	annotation not available	0.857
ENSNVIP00000006339	ENSNVIP00000012372	ENSNVIP00000006339	ENSNVIP00000012372	annotation not available	annotation not available	0.857
ENSNVIP00000006339	ENSNVIP00000021199	ENSNVIP00000006339	ENSNVIP00000021199	annotation not available	annotation not available	0.703
ENSNVIP00000006339	PAM16	ENSNVIP00000006339	ENSNVIP00000001136	annotation not available	Presequence translocase associated motor 16.	0.973
ENSNVIP00000006339	TIMM17A	ENSNVIP00000006339	ENSNVIP00000018521	annotation not available	Translocase of inner mitochondrial membrane 17A.	0.968
ENSNVIP00000006339	TIMM17B	ENSNVIP00000006339	ENSNVIP00000008571	annotation not available	Translocase of inner mitochondrial membrane 17B.	0.965
ENSNVIP00000006339	TIMM21	ENSNVIP00000006339	ENSNVIP00000014954	annotation not available	Translocase of inner mitochondrial membrane 21.	0.981
ENSNVIP00000006339	TIMM44	ENSNVIP00000006339	ENSNVIP00000022709	annotation not available	Translocase of inner mitochondrial membrane 44.	0.964
ENSNVIP00000006339	TIMM50	ENSNVIP00000006339	ENSNVIP00000013635	annotation not available	Translocase of inner mitochondrial membrane 50.	0.972
ENSNVIP00000010454	DNAJC15	ENSNVIP00000010454	ENSNVIP00000001295	annotation not available	DnaJ heat shock protein family (Hsp40) member C15.	0.569