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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUFIP1Nuclear FMR1 interacting protein 1. (497 aa)    
Predicted Functional Partners:
SPEN
Spen family transcriptional repressor.
      
 0.613
PIH1D1
PIH1 domain containing 1.
    
 
 0.551
ENSNVIP00000013796
Chromosome 12 open reading frame 45.
    
 0.544
CREB3L2
cAMP responsive element binding protein 3 like 2.
      
 0.525
ZNHIT2
Zinc finger HIT-type containing 2.
    
 
 0.506
ZNHIT3
Zinc finger HIT-type containing 3.
    
 
 0.494
RPAP3
RNA polymerase II associated protein 3.
   
 0.488
SDAD1
SDA1 domain containing 1.
      
 0.468
ZNHIT6
Zinc finger HIT-type containing 6.
   
 
 0.457
CEP89
Centrosomal protein 89.
      
 0.434
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.