STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATL1Atlastin GTPase 1. (558 aa)    
Predicted Functional Partners:
SPAST
Spastin.
   
 
 0.782
REEP1
Receptor accessory protein 1.
    
 
 0.779
ENSNVIP00000028734
Receptor accessory protein 4.
   
 
 0.778
RTN2
Reticulon 2.
    
 
 0.774
REEP3
Receptor accessory protein 3.
   
 
 0.736
ARL14
ADP ribosylation factor like GTPase 14.
   
 
 0.726
RTN3
Reticulon 3.
    
 
 0.688
REEP2
Receptor accessory protein 2.
    
 
 0.671
RTN4
Reticulon 4.
    
 
 0.668
SPART
Spartin.
      
 0.655
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.