STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCOF1Treacle ribosome biogenesis factor 1. (1389 aa)    
Predicted Functional Partners:
NOLC1
Nucleolar and coiled-body phosphoprotein 1.
   
 
 0.916
ENSNVIP00000013799
Kelch repeat and BTB domain containing 8.
    
 
 0.894
NOP56
NOP56 ribonucleoprotein.
   
 
 0.813
ENSNVIP00000029167
annotation not available
     
 0.727
ENSNVIP00000032025
annotation not available
    
 0.657
ARR3
Arrestin 3.
    
 0.642
ARRB2
Arrestin beta 2.
    
 0.642
ARRB1
Arrestin beta 1.
    
 0.642
TARBP2
TARBP2 subunit of RISC loading complex.
    
   0.641
ENSNVIP00000008013
Protein activator of interferon induced protein kinase EIF2AK2.
    
   0.641
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.