STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRMPLymphoid restricted membrane protein. (497 aa)    
Predicted Functional Partners:
SUN1
Sad1 and UNC84 domain containing 1.
    
 
 0.943
SUN2
Sad1 and UNC84 domain containing 2.
    
 
 0.843
SH2D7
SH2 domain containing 7.
      
 0.637
PRKG2
Protein kinase cGMP-dependent 2.
   
 0.566
PRKG1
Protein kinase cGMP-dependent 1.
   
 0.566
CCDC155
Coiled-coil domain containing 155.
 
    
 0.553
SUN3
Sad1 and UNC84 domain containing 3.
    
 
 0.535
DHX16
DEAH-box helicase 16.
    
 0.510
SUN5
Sad1 and UNC84 domain containing 5.
    
 
 0.506
ENSNVIP00000030774
SAS-6 centriolar assembly protein.
    
 0.504
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.