STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL4A4Collagen type IV alpha 4 chain. (1690 aa)    
Predicted Functional Partners:
ITGA1
Integrin subunit alpha 1.
     
 0.927
CD44
CD44 molecule (Indian blood group).
    
 0.924
ENSNVIP00000021409
annotation not available
     
 0.923
ITGA3
Integrin subunit alpha 3.
    
 0.909
ITGA10
Integrin subunit alpha 10.
     
 0.908
ITGB4
Integrin subunit beta 4.
    
 0.907
ITGA4
Integrin subunit alpha 4.
    
 0.903
ITGB1
Integrin subunit beta 1.
    
 0.901
ITGA2
Integrin subunit alpha 2.
     
 0.898
ITGA6
Integrin subunit alpha 6.
    
 0.898
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.