STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH17Cadherin 17. (832 aa)    
Predicted Functional Partners:
ENSNVIP00000031759
Catenin beta 1.
    
 0.974
CTNND1
Catenin delta 1.
    
 0.890
JUP
Junction plakoglobin.
    
 0.835
CDHR5
Cadherin related family member 5.
   
 
 0.810
CDH8
Cadherin 8.
     
0.804
CDH7
Cadherin 7.
     
0.799
CDH13
Cadherin 13.
     
0.796
CTNNA1
Catenin alpha 1.
   
 0.785
CTNNA2
Catenin alpha 2.
   
 0.785
ENSNVIP00000012803
Cadherin 18.
     
0.770
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.